Publications

Won THyung, Arifuzzaman M, Parkhurst CN, Miranda IC, Zhang B, Hu E, Kashyap S, Letourneau J, Jin W-B, Fu Y et al..  2025.  Host metabolism balances microbial regulation of bile acid signalling.. Nature. 638(8049):216-224.

Arifuzzaman M.  2025.  Illuminating microbial dark matter: Dietary alterations uncover microbial regulation of immunity and metabolism.. Science. 389(6755):38.

Arifuzzaman M, Won THyung, Yano H, Uddin J, Emanuel ER, Hu E, Zhang W, Li T-T, Jin W-B, Grier A et al..  2024.  Dietary fiber is a critical determinant of pathologic ILC2 responses and intestinal inflammation.. J Exp Med. 221(5)

Emanuel E, Arifuzzaman M, Artis D.  2024.  Epithelial-neuronal-immune cell interactions: Implications for immunity, inflammation, and tissue homeostasis at mucosal sites.. J Allergy Clin Immunol. 153(5):1169-1180.

Li T-T, Chen X, Huo D, Arifuzzaman M, Qiao S, Jin W-B, Shi H, Li XV, Iliev ID, Artis D et al..  2024.  Microbiota metabolism of intestinal amino acids impacts host nutrient homeostasis and physiology.. Cell Host Microbe. 32(5):661-675.e10.

Arifuzzaman M, Collins N, Guo C-J, Artis D.  2024.  Nutritional regulation of microbiota-derived metabolites: Implications for immunity and inflammation.. Immunity. 57(1):14-27.

Jin W-B, Li T-T, Huo D, Qu S, Li XV, Arifuzzaman M, Lima SF, Shi H-Q, Wang A, Putzel GG et al..  2022.  Genetic manipulation of gut microbes enables single-gene interrogation in a complex microbiome.. Cell. 185(3):547-562.e22.

Zhang W, Lyu M, Bessman NJ, Xie Z, Arifuzzaman M, Yano H, Parkhurst CN, Chu C, Zhou L, Putzel GG et al..  2022.  Gut-innervating nociceptors regulate the intestinal microbiota to promote tissue protection.. Cell. 185(22):4170-4189.e20.

Arifuzzaman M, Won THyung, Li T-T, Yano H, Digumarthi S, Heras AF, Zhang W, Parkhurst CN, Kashyap S, Jin W-B et al..  2022.  Inulin fibre promotes microbiota-derived bile acids and type 2 inflammation.. Nature. 611(7936):578-584.

Jarick KJ, Topczewska PM, Jakob MO, Yano H, Arifuzzaman M, Gao X, Boulekou S, Stokic-Trtica V, Leclère PS, Preußer A et al..  2022.  Non-redundant functions of group 2 innate lymphoid cells.. Nature. 611(7937):794-800.

Chu C, Parkhurst CN, Zhang W, Zhou L, Yano H, Arifuzzaman M, Artis D.  2021.  The ChAT-acetylcholine pathway promotes group 2 innate lymphoid cell responses and anti-helminth immunity.. Sci Immunol. 6(57)